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Saturday, October 9, 2021

COVID vaccines cut the risk of transmitting Delta — but not for long

 The first study to look directly at how well vaccines prevent the spread of the Delta variant of SARS-CoV-2 brings good news and bad.

The study shows that people who become infected with the Delta variant are less likely to pass the virus to their close contacts if they have already had a COVID-19 vaccine than if they haven’t1. But that protective effect is relatively small, and dwindles alarmingly at three months after the receipt of the second shot.

The findings add to scientists’ understanding of the vaccination’s effect on curbing Delta’s spread, but are “both more and less encouraging”, says Marm Kilpatrick, an infectious-disease researcher at the University of California, Santa Cruz.

Previous studies have found that people infected with Delta have roughly the same levels of viral genetic materials in their noses regardless of whether they’d previously been vaccinated, suggesting that vaccinated and unvaccinated people might be equally infectious2. But studies also suggest that vaccinated people are less likely to spread the virus if they subsequently catch Delta: their levels of nasal virus drop faster than do those of unvaccinated infected people, and their nasal swabs contain smaller amounts of infectious virus3,4.

The latest study examined the effect of vaccines on transmission more directly. It analysed testing data from 139,164 close contacts of 95,716 people infected with SARS-CoV-2 between January and August 2021 in the United Kingdom, when the Alpha and Delta variants were competing for dominance.

The authors found that although the vaccines did offer some protection against infection and onward transmission, Delta dampened that effect. A person who was fully vaccinated and then had a ‘breakthrough’ Delta infection was almost twice as likely to pass on the virus as someone who was infected with Alpha. And that was on top of the higher risk of having a breakthrough infection caused by Delta than one caused by Alpha.

Unfortunately, the vaccine’s beneficial effect on Delta transmission waned to almost negligible levels over time. In people infected 2 weeks after receiving the vaccine developed by the University of Oxford and AstraZeneca, both in the UK, the chance that an unvaccinated close contact would test positive was 57%, but 3 months later, that chance rose to 67%. The latter figure is on par with the likelihood that an unvaccinated person will spread the virus.

A reduction was also observed in people vaccinated with the jab made by US company Pfizer and German firm BioNTech. The risk of spreading the Delta infection soon after vaccination with that jab was 42%, but increased to 58% with time.

Delta vaults ahead

“There’s a step-change with Alpha versus Delta, but then there’s also a change over time,” says co-author David Eyre, an epidemiologist at the University of Oxford, UK. The results “possibly explain why we’ve seen so much onward transmission of Delta despite widespread vaccination”.

But the results also offer the “intriguing possibility that if you do run a booster campaign because you want to protect individuals, it may also have this effect of reducing transmission,” says Eyre.

Booster campaigns raise a new uncertainty, says Stephen Riley, an infectious-diseases researcher at Imperial College London: “whether the same waning of protection from infectiousness will occur after the third dose”.

The study has not yet been peer reviewed.

doi: https://doi.org/10.1038/d41586-021-02689-y

https://www.nature.com/articles/d41586-021-02689-y

A genetic link between risk for Alzheimer's, severe COVID-19 outcomes via OAS1 gene

 Naciye Magusali, Andrew C Graham, Thomas M Piers, Pantila Panichnantakul, Umran Yaman, Maryam Shoai, Regina H Reynolds, Juan A Botia, Keeley J Brookes, Tamar Guetta-Baranes ... 

DOI:  https://doi.org/10.1093/brain/awab337

PDF: https://academic.oup.com/brain/advance-article-pdf/doi/10.1093/brain/awab337/40516064/awab337.pdf

Abstract

Recently, we reported oligoadenylate synthetase 1 (OAS1) contributed to the risk of Alzheimer’s disease, by its enrichment in transcriptional networks expressed by microglia. However, the function of OAS1 within microglia was not known.

Using genotyping from 1313 individuals with sporadic Alzheimer’s disease and 1234 control individuals, we confirm the OAS1 variant, rs1131454, is associated with increased risk for Alzheimer’s disease. The same OAS1 locus has been recently associated with severe coronavirus disease 2019 (COVID-19) outcomes, linking risk for both diseases. The single nucleotide polymorphisms rs1131454(A) and rs4766676(T) are associated with Alzheimer’s disease, and rs10735079(A) and rs6489867(T) are associated with severe COVID-19, where the risk alleles are linked with decreased OAS1 expression. Analysing single-cell RNA-sequencing data of myeloid cells from Alzheimer’s disease and COVID-19 patients, we identify co-expression networks containing interferon (IFN)-responsive genes, including OAS1, which are significantly upregulated with age and both diseases. In human induced pluripotent stem cell-derived microglia with lowered OAS1 expression, we show exaggerated production of TNF-α with IFN-γ stimulation, indicating OAS1 is required to limit the pro-inflammatory response of myeloid cells.

Collectively, our data support a link between genetic risk for Alzheimer’s disease and susceptibility to critical illness with COVID-19 centred on OAS1, a finding with potential implications for future treatments of Alzheimer’s disease and COVID-19, and development of biomarkers to track disease progression.


Funding

N.M. was supported by Alzheimer Nederland, the Erasmus+ Traineeship programme, and then a PhD studentship funded by Eli Lilly and Co. T.M.P. was supported by funding to J.M.P. and J.H. from the Innovative Medicines Initiative 2 Joint Undertaking under grant agreement 115976. This Joint Undertaking receives support from the European Union's Horizon 2020 research and innovation programme and the European Federation of Pharmaceutical Industries and Associations (EFPIA). R.H.R. was supported through the award of a Leonard Wolfson Doctoral Training Fellowship in Neurodegeneration. J.A.B. is supported through the Science and Technology Agency, Séneca Foundation, CARM, Spain (research project 00007/COVI/20). The University of Nottingham Group is funded by ARUK and hosts the ARUK Consortium DNA Bank, with the members given in the Appendix below. J.H. is supported by the Dolby Foundation, and by the National Institute for Health Research University College London Hospitals Biomedical Research Centre. D.A.S. also received funding from the Alzheimer’s Research UK (ARUK) pump priming scheme via the UCL network. This work was funded by the UK DRI, which receives its funding from the DRI Ltd, funded by the UK Medical Research Council, Alzheimer’s Society and ARUK.

Competing interests

The authors report no competing interests.

https://academic.oup.com/brain/advance-article/doi/10.1093/brain/awab337/6382473?searchresult=1#304716211

Fauci: 'Strongly suspects' COVID-19 deaths will go down in winter

 Top infectious diseases expert Anthony Fauci said that he “strongly suspects” COVID-19 deaths will go down in the winter.

During an interview with Greta Van Susteren to be aired on Sunday, Fauci was asked if he expected another surge of coronavirus cases due to the delta variant or other variants such as mu this winter.

He responded that it would depend on how well the United States is able to vaccinate the millions of Americans who have not yet gotten a coronavirus shot.

Fortunately, right now, over the last few weeks, we've seen a turnaround in the slope in going down in both cases and hospitalizations. Deaths are still up, but it's really flattening, so it's a lagging indicator,” Fauci told Van Susteren.

“I strongly suspect that you're going to start seeing the deaths go down similar to the hospitalizations; how quickly they go down and how thoroughly they go down is going to depend a lot on a number of circumstances, which will be influenced by things like the colder weather, people doing things indoors, how well they go by the CDC [Centers for Disease Control and Prevention] guidelines of, when you have a lot of infection in the community, even though you're vaccinated, when you are not home but outside congregate settings in the public, wearing masks, I think would be very prudent,” he added.

Experts are divided about whether this most recent COVID-19 surge of cases will be the last one. 

Data from the CDC indicates that nationwide COVID-19 cases are generally starting to trend downward, but only about 56 percent of the country’s total population has been fully vaccinated. Colder weather, with more people being situated inside, could make it difficult to predict how well COVID-19 cases get tamped down later in the fall and upcoming winter given that that environment has allowed the virus to spread previously.

Leana Wen, public health professor at George Washington University and an emergency physician, told The Hill that some states are still grappling with the latest delta wave.

“I'm very concerned about people becoming complacent because they think that the delta wave is passing us,” Wen said. “We have seen this happen before, where there is a rise in the number of cases, then a decline, and then people let down their guard. And as a result, we plateau at a very high level of cases. That's unacceptable.”

https://thehill.com/policy/healthcare/576073-fauci-says-he-strongly-suspects-that-covid-19-deaths-will-go-down-in-the

India Preps for Surge of 450K-500K Covid Cases a Day

 Amid the threat of the third wave of coronavirus, the government has asked people to avoid crowded places during the coming festival and wedding season as India’s fight against the pandemic is still on. “Please watch your October, November, December,”Lav Agarwal, Joint Secretary with the Health Ministry, said warning people about the threat of COVID-19 resurgence during the coming festivals such as Dussehra, Diwali, Durga Puja, Milan-un-Id and Christmas and wedding season. Agarwal was speaking at the weekly media briefing in the national capital. Besides, NITI Aayog member (Health) V K Paul was also present. “We cannot take the current stable situation for granted. We have to be mindful of the fact that the pandemic is going on and can take an untoward turn if we are not careful,” Paul said.

https://www.india.com/news/india/third-wave-of-corona-preparing-for-surge-of-4-5-to-5-lakh-covid-cases-a-day-says-govt-calls-october-december-crucial-5044315/

Cal. 1st to let kids add parents to insurance plans

 California is the first state to let some adult children add their parents as dependents on their insurance plans, a move advocates hope will cover the small population of people living in the country illegally who don’t qualify for other assistance programs.

The trend nationally has been to let children linger on their parents’ health insurance plans. Former President Barack Obama’s health care law let children stay on their parents’ plans until age 26. Some states have gone further and let kids stay on their parents’ plans until at least age 30, including Florida, Illinois, Pennsylvania and New Jersey.

But California is now the first state to go the other direction by letting some adults join their kids’ health insurance plans. Gov. Gavin Newsom, a Democrat, signed the law this week, but it won’t take effect until 2023.

“The signing of the Parent Healthcare Act will help more families care for their parents the way they cared for us,” Insurance Commissioner Ricardo Lara said.

To be eligible, adults must rely on their child for at least 50% of their total support. The law applies only to people who buy their health insurance on the individual market. Those who get insurance through their jobs, which includes most people in the state, aren’t eligible.

That makes the law much cheaper. A previous version, which would have applied to more people, could have increased employer premiums between $200 million and $800 million per year, depending on how many people enrolled. That prompted business groups, including the California Chamber of Commerce, to oppose the bill — winning key concessions.

This narrower version of the law ensures far fewer people can enroll. The California Department of Insurance estimates just 15,000 adults will use this law, prompting an annual increase of between $12 million and $48 million per year for individual premiums, according to an analysis by the Senate Appropriations Committee. The change was enough for the Chamber of Commerce to remove its opposition.

The law’s author, Democratic Assemblyman Miguel Santiago of Los Angeles, said it targets people who can’t get subsidized health insurance because they are living in the country illegally.

Covered California, the state’s health insurance marketplace, offers discount insurance plans — but only to citizens. California’s Medicaid program offers government-funded insurance to people 50 and over and 25 and younger regardless of their immigration status. But some adults might be ineligible because they make just over the income limits.

The University of California Berkeley Labor Center predicts more than 3 million people won’t have health insurance in California next year, 65% of them people who are living in the country illegally.

The law is “a way to close that gap,” Santiago said, while also helping other adults who “fall through the cracks.”

“We all talk about increasing health care access, and here was a real easy way to do it,” he said.

https://apnews.com/article/lifestyle-business-barack-obama-gavin-newsom-california-cecb24a75d139450ed4d55839f107e42

Why COVID vaccines didn’t win a science Nobel this year

 And the winner is … not COVID-19 vaccines. Despite sky-high hopes that one of the Nobel committees would recognize research on vaccines that have been administered to billions of people and have saved countless lives, this year’s science Nobels instead went to fundamental advances that had been tipped to win for years.

Some scientists expressed surprise and disappointment at the omission of COVID-19 vaccines, particularly those developed using messenger RNA technology, which have launched a new class of vaccine.

“The Nobel Prize folks could have done something with this year’s award to directly aid global health efforts during a 100-year pandemic. And they chose not to. This is utter dereliction. It is an indefensible decision that will cost lives,” Alexey Merz, a cell biologist at the University of Washington in Seattle, wrote on Twitter on 5 October, after research into the mechanisms behind senses won this year’s medicine or physiology prize.

But Nobel prize insiders and watchers say that timing, technical details and politics meant that a nod this year was a long shot. However, the impact of COVID-19 vaccines — and the underlying advances — indicate that it shouldn’t be long before researchers behind the work get a call from Stockholm.

“The development of mRNA vaccines is a wonderful success story that has had enormous positive consequences for humankind. And we’re all very grateful to the scientists,” says Göran Hansson, secretary-general of the Royal Swedish Academy of Sciences in Stockholm, which selects the prize winners. “This is a kind of discovery that will receive nominations. But we need to take time.”

Not mRNA’s year

The timing didn’t work in favour of a COVID-19 Nobel this year. Nominations for this year’s prizes had to be submitted by 1 February. This was more than two months after the first mRNA vaccines, and some others, proved their mettle in clinical trials, but before their impact on the pandemic was fully clear, Hansson notes. “Follow-up is really still happening now.”

History was also against a nod for COVID-19 vaccines. The gap between a discovery and recognition with a scientific Nobel prize has grown over time, says Santo Fortunato, a physicist and director of the Indiana University Network Science Institute in Bloomington, and it now stands at an average of more than 30 years. The first experimental mRNA vaccines were tested in the mid-1990s, but key advances underlying the jabs developed by Moderna in Cambridge, Massachusetts, and by Pfizer in New York City and BioNTech in Mainz, Germany, didn’t come until the 2000s. And one could argue that the technology’s impact wasn’t apparent until this year.

But Fortunato says that major discoveries do tend to be recognized much more quickly. One potential parallel for mRNA vaccines is the detection of gravitational waves. The existence of gravitational waves was predicted by Albert Einstein in 1915, but it took a century for researchers to develop the tools to detect them directly. Researchers announced their discovery in February 2016, and scientists behind the observations and theoretical work won the 2017 physics prize. For COVID-19 vaccines, “I’m not surprised it didn’t happen this year. I have no doubt it will be awarded really shortly,” Fortunato says.

When it comes to COVID-19, Brian Uzzi, a computational scientist at Northwestern University in Evanston, Illinois, who studies scientific prizes, expects the Nobel committees to look more broadly than the development of vaccines. “Nobel prizes are more likely to go to scientists who teach people how to fish, rather than give them a fish,” he says. “They like to give prizes to people who do fundamental research that can go on and solve lots of different problems, not just one problem.” The committee could be waiting to gauge the impacts of mRNA vaccine technology on other infections — such as those caused by other coronaviruses, Uzzi speculates.

Nobel harbingers

COVID-19 vaccines have already started hoovering up major scientific prizes: last month, one of the US$3-million Breakthrough prizes went to two scientists who developed modifications that silenced unwanted immune responses and were key to the Moderna and Pfizer–BioNTech vaccines. The same researchers also won one of the Lasker Foundation’s annual awards (considered by some to be predictors of Nobel prizes). The Nobel committees tend to be interested in rewarding research that has stood the test of time, rather than the latest advances, so Uzzi expects there will be more awards for COVID-19 vaccines before Stockholm comes knocking.

If the vaccines are awarded a Nobel prize, the committee will need to make some difficult decisions about whom to recognize and for what, say scientists. “I’m not surprised they held their fire,” says David Naylor, a physician-scientist at the University of Toronto, Canada. He expects the committee to look past the academic and corporate teams that developed the vaccines, and instead focus on more foundational work, such as that underlying mRNA vaccines. But even there, it’s not clear-cut who the recipients ought to be.

“I think the mRNA vaccines are obvious candidates,” agrees Arturo Casadevall, a microbiologist at John Hopkins Bloomberg School of Public Health in Baltimore, Maryland, who notes that the vaccines’ development has deep roots in several disciplines. “I can imagine the committee taking its time to sort out which contributions to recognize since many fields contributed to their deployment.”

Working all this out takes time, Hansson says. “We want to give credit to the right people. And for the right discovery,” he says. “So stay tuned.”

doi: https://doi.org/10.1038/d41586-021-02754-6

https://www.nature.com/articles/d41586-021-02754-6

'3rd World’ NYC drug store shelves empty amid shoplifting surge

 Thanks to a citywide shoplifting tsunami, bare necessities are now rare luxuries on drug-store shelves across New York City.

“It looks like the Third World,” bemoaned one Manhattan resident, after eyeing the aisles of a CVS on Sixth Avenue in Soho desperately low of toothpaste, face wash and hand sanitizer, among a long list of other items.

“They’ve all been stolen,” a CVS employee told The Post.

State bail reform laws make shoplifting a promising career option for some New York City crooks. One man, Isaac Rodriguez, 22, of Queens, was arrested for shoplifting 46 times this year alone, The Post exclusively reported last week.

The blame goes straight to the halls of power in Albany, said New York City top cop Dermot Shea.

“Insanity,” the police commissioner tweeted last week in response to The Post report. “No other way to describe the resulting crime that has flowed from disastrous bail reform law.” 

Ninth Precinct police officers stand guard inside the Duane Reade on Avenue B and East 2nd St., where certain items are kept locked.
Ninth Precinct police officers stand guard inside the Duane Reade on Avenue B and East 2nd St., where certain items are kept locked.Helayne Seidman

Serial shoplifters, even if arrested, typically walk free the same day. Cases against them are often not prosecuted. Drug stores, filled with aisles of small necessities, offer an easy-to-harvest goldmine for thieves.

Rodriguez allegedly stole from Walgreens stores 37 times, lifting everything from protein drinks to soap, baby formula and body lotions, often simply filling up a bag with items then walking out the front door without paying.

There are 77 other thieves right now walking the streets of New York with rap sheets of 20 or more shoplifting charges, NYPD sources say.

As of Sept. 12, the city has seen 26,385 complaints of retail theft — the most ever recorded (going back to 1995). It’s a 32 percent spike from last year (20,024) and 38 percent surge from 2014 (19,166).

Post reporters visited a dozen CVS, Duane Reade/Walgreens and Rite Aid stores around the city and found the same shocking situation in all of them.

Large swaths of barren shelves, in some cases frighteningly empty of almost every imaginable need: cereal, batteries, hand wash, diapers, paper goods and baby formula.

Good luck finding tampons. Each Post visit revealed almost none on the shelves. Displays of relative luxuries such as lipstick and shoe polish also looked neglected.

Only 12 of 57 paper goods listed on price displays at a CVS on 50th Avenue in Long Island City were in stock. About 8 in 10 clothing detergents were missing from the shelves of a Rite Aid on Broadway in Astoria; as were all 27 varieties of Ensure nutrition drinks and all 15 types of Irish Spring soap and body wash.

empty CVS stack
State bail reform laws make shoplifting a promising career option for some New York City crooks.Helayne Seidman

Two cops stood sentinel inside the doors of the Duane Reade at the corner of Avenue B and East Second Street on the Lower East Side this week.

“There’s a lot of theft here,” one of the officers said, adding that they’ve made guard duty at the store part of their neighborhood patrol efforts.

The Wall Street Journal reported last month that retailers are the target of a $45 billion organized crime theft spree, with lifted goods often being resold on Amazon.

“Reported thefts (at CVS) have ballooned 30% since the pandemic began,” the WSJ report states.

Disruptions in global supply chains have fueled shortages at drug stores and other retailers across the country.

“Product supply challenges are currently impacting most of the retail industry,” CVS spokesman Matthew Blanchette told The Post. “We’re continuing to work with our vendors to address this issue and we regret any inconvenience that our customers may be experiencing.” 

Retailers here in New York and around the nation, meanwhile, struggle to find people to re-stock those shelves; while trucking companies report difficulty finding drivers to make much-needed deliveries.

https://nypost.com/2021/10/09/nyc-drug-store-shelves-empty-amid-shoplifting-surge/