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Wednesday, April 21, 2021

As fears mount over J&J and As­traZeneca, No­vavax en­ters a shaky spot­light

 As concerns rise around the J&J and AstraZeneca vaccines, global attention is increasingly turning to the little, 33-year-old, productless, bankruptcy-flirting biotech that could: Novavax.


In the now 16-month race to develop and deploy Covid-19 vaccines, Novavax has at times seemed like the pandemic’s most unsuspecting frontrunner and at times like an overhyped also-ran. Although they started the pandemic with only enough cash to last 6 months, they leveraged old connections and believers into $2 billion and emerged last summer with data experts said surpassed Pfizer and Moderna. They unveiled plans to quickly scale to 2 billion doses. Then they couldn’t even make enough material to run their US trial and watched four other companies beat them to the finish line.


Two of those companies, though, J&J and AstraZeneca, are facing big questions about the future of their vaccines. While the US, UK and Europe jumped to the front of the queue for mRNA vaccines, much of the world relied on the two Big Pharmas and the over 4 billion doses they promised to produce in 2021. But both have faced persistent, occasionally bewildering, production delays. And now experts fear that concerns over a rare but serious blood clot associated with the two vaccines could prompt countries to suspend them or deter people around the globe from taking them.




“People are extremely nervous about whether the [clots] are going to throw J&J and AstraZeneca into a retracted suspension,” says Steve Morrison, director of the global health policy center at the Center for Strategic and International studies. “It’s too difficult, it’s too early to judge. But people are very, very frightened about that.”


That, Morrison adds, now makes the tiny Maryland-based biotech and their quixotic vaccine quest all the more essential for vaccinating the world. “People are going to be putting a lot more of a spotlight on Novavax,” he says.


Novavax shares some of the same attributes that led experts to talk about AstraZeneca and J&J as global vaccines. Based on more traditional technology than mRNA, the shot is easier to manufacture, can be stored at normal refrigeration temperatures and delivered to remote and under-resourced regions.


AstraZeneca provided the backbone for COVAX, the WHO-Gavi initiative to supply vaccines to poorer countries, promising 550 million doses, including virtually all of the shots they’ve shipped thus far. Novavax pledged double that: 1.1 billion doses —  each of which now looms larger as many of the AstraZeneca vaccines COVAX shipped sit on refrigerator shelves, unused, around the world.



“There was some concern that it might just hit the market too late and be unnecessary. But I think that’s no longer a concern,” Andrea Taylor, a researcher at Duke University’s Global Health Institute who has been tracking vaccine purchasing agreements, says of Novavax’s shot. “It will be really important.”


Novavax, though, isn’t quite yet ready to shine. If the past few months have given the world a crash course in vaccine manufacturing, Novavax has provided the most interesting case study. In 2019, after a setback on their RSV vaccine, the company sold off their only factory. They have since tried to pull off one of the most herculean feats in the history of industry: to go from a little-known, barely solvent company with no approved products and no manufacturing facilities to a biotech that could annually churn out 2 billion doses of the world’s most sought after product.


Amazingly, it’s largely been a success. Factories on three different continents are now churning out or preparing to churn out different components of Novavax’s vaccine, NVX-CoV2373. And the data that have come back are strong: In a 15,000-person UK study, the vaccine appeared as effective as the Pfizer-BioNTech and Moderna shots: 96% effective against the original SARS-CoV-2 virus and 86% effective against the variant now common in the country.


“Everything about it that’s in the public domain looks promising,” says John Moore, an immunologist at Cornell, who was so impressed by the early results that he signed up for their Phase III trial. “The question is when is it going to get approved, and timelines seem to be getting pushed back and it’s not obvious why.”


At a time when governments and public health officials are urging vaccine manufacturers to scale, Novavax has come up against the limits of what the world or any single company can handle. Virtually overnight, they set up a network of outside manufacturers more ambitious than one outside executive said he’s ever seen, but they struggled at times to transfer their technology there amid pandemic travel restrictions. They were kicked out of one factory by the same government that’s bankrolled their effort. Competing with larger competitors, they’ve found themselves short on raw materials as diverse as Chilean tree bark and bioreactor bags. They signed a deal with India’s Serum Institute to produce many of their COVAX doses but now face the realistic chance that even when Serum gets to full capacity — and they are behind — India’s government, dealing with the world’s worst active outbreak, won’t let the shots leave the country.


Novavax has said they will read out on their US trial and file for authorization in the US and Europe this quarter, but they have refused to say how many doses they have on hand if they get a regulatory OK. CEO Stanley Erck first claimed last summer they could start producing vaccines at a rate of 2 billion doses per year “very shortly.” They’ve pushed that target to Q3, although Taylor doubts they will hit it. They’re trying as hard as they can, but so is everyone else.


“There continues to be a lot of concern that supply isn’t being increased fast enough,” says Rajeev Venkayya, head of vaccines at Takeda, which has partnered to produce Novavax’s shot.  “People need to understand that this is not something that is easily scalable to begin with, it’s already been scaled to a greater degree and faster than has ever been done before. And to do more just places greater risk on the entire system.”


Takeda’s pandemic influenza plant in Hikari, Japan, where the company is trying to manufacture Novavax doses




When Novavax CBO John Trizzino called up an old colleague at Emergent BioSolutions in February of 2020, he wasn’t looking to produce billions of doses. Only a handful of coronavirus cases — it wasn’t yet called Covid-19 — had been confirmed in the US, and Trizzino just needed someone to build a few lots of the construct his research team had made. Emergent’s Baltimore plant was just a short drive from Novavax’s headquarters and the two had worked on projects together before.



It would turn into the first strange twist in their manufacturing effort. Although Emergent produced material for the company’s successful Phase I/II trial, the federal government notified Novavax over the summer that they would have to move. Although the US was backing Novavax’s shot, they deemed J&J a higher priority and installed them at Emergent’s facilities, pushing the smaller company to Fujifilm-run plants in North Carolina and Texas.


It seemed like a significant setback when The Washington Post reported the move, one that pushed back their Phase III trial and cost them in the vaccine race. But then this month word got out that Emergent had to destroy 15 million doses of J&J’s vaccine after mixing up ingredients, the beginning of a scandal that led the FDA to shut down the whole plant this week. Suddenly the calculus looked a bit different.


“It’s like the old foxhole theory,” says Trizzino, who praised Emergent as a professional organization that hit a snag trying to scale rapidly. “You’re just glad it wasn’t you.”


By March, Novavax’s ambitions had grown. Erck, invited to the Donald Trump vaccine summit at the White House, told the president that they wanted to get to one billion doses. “Frankly, we need money,” he said. “We need money to get scale.”


Novavax would soon get that money, earning $388 million from Coalition for Epidemic Preparedness in May and a $1.6 billion contract from the Trump Administration’s Operation Warp Speed in June, the largest contract each entity had given out to that point. A Trump official told reporters the size matched the assistance Novavax, as a smaller company, needed in manufacturing.


The CEPI funding allowed Novavax to acquire an old, 150,000-foot facility in the Czech Republic that the Serum Institute had been using to make polio vaccines before the Czech government decided that the polio vaccine — a weakened, live virus that can on rare occasions mutate back into pathogenic polio — was not something they wanted made in their borders. The deal came with 150 employees and capacity, the company said, to make 1 billion doses.


Trizzino said the money accelerated talks that had already begun. Behind the scenes, Novavax had already been laying the groundwork for a major expansion that, after they got funding, came to include 10 different partners on three continents.



“Just the nature of how they put all of this together,” says Mark Womack, CBO of the CDMO AGC Biologics. “I don’t think anyone’s ever seen anything like it.”


In early April, Womack checked LinkedIn to find a message waiting for him. It was from Tim Hahn, a former Novavax CMC executive who the company had rehired to help figure out how to scale their vaccine. Hahn explained that he’d been urgently trying to get in touch and that he had to call him now.


Novavax’s shot consists of two components. There’s the antigen, a synthetic copy of the coronavirus spike protein. Grown in insect cell lines, it provides the core part of the vaccine, training the immune system to recognize and neutralize the virus. The Czech facility and the US Fujifilm facilities are producing that component. The second part is one of the oldest tools in vaccination, one the other leading Covid-19 candidates don’t use: an adjuvant, an extra ingredient meant to boost the body’s innate immune response.


Novavax specifically relies on an extract from Chilean tree bark, which is then packaged into a fat particle 40 billionths of a meter in diameter — a product they call Matrix-M. If Novavax wanted to make 2 billion doses of vaccine, they would also need to make 2 billion of Matrix-M. And AGC had the facilities to do it.


Over four days, Womack said, the pair hammered an agreement that would normally take months. Formally announced on June 4, the deal saw AGC repurpose a line in their Copenhagen facility to make 2 billion doses of Matrix-M. Two months later, after Novavax won federal backing, they added another 1 billion doses at a new building in Seattle. In both cases, AGC reshuffled plans they had to use the facilities for a motley of other biological products.


“They needed us to move at a speed that maybe no CDMO, in the history of our industry, ever had,” Womack said.


That meant doing other things differently than just writing an agreement in four days. AGC generally acquired its own ingredients. Now they would rely in part on ingredients from Novavax, and they would move forward on buying new equipment and hiring dozens of new staff members without assurance they had been secured — which they sometimes weren’t. The Chilean tree extract, saponin, is a scarce commodity and they didn’t always have a steady supply.


Still, the companies eventually managed to resolve those and both the Seattle and Copenhagen plants are churning at full speed, encasing the extract in fat to build two particles, and sending them off to the company’s North American and European fill-finish sites to be combined with the protein and injected into vials.


An overview of Novavax’s Covid-19 supply chain. “Just the nature of how they put all of this together,” says Mark Womack, CBO of the CDMO AGC Biologics. “I don’t think anyone’s ever seen anything like it.”




Not every facility Novavax enlisted is now on track. The company has been limited both by the quantity of select raw materials that the world has never before needed in such quantities, and the speed at which they could conduct tech transfer.


Tech transfer, one of many once-obscure words that officials are now becoming familiar with, simply refers to the process of one company setting up its production process at another company’s facilities. For vaccines, it’s a far more important step than sharing patents or intellectual property, but it can be intensive. Moderna CEO Stéphane Bancel has said part of the reason his company has not enlisted more outside partners is that they don’t have enough trained personnel to do so.


Novavax had an advantage when it came to tech transfer. Their protein-based technology is similar to vaccines, such as the hepatitis b shot, which is already routinely made around the world.  The company, Trizzino said, has relied on a single team of about a dozen people who have flown around the world to build up the vaccine.


That might have worked out smoothly for one new facility. But the company is now trying to do it on an unprecedented scale.


“The more partnerships you add, you’re spreading this team thinner and thinner, which makes it harder to manage the risk of each of these partnerships,” says Venkayya of Takeda, speaking generally about tech transfer. “This is going to stretch any organization.”



Maria Bottazzi, associate dean of the National School for Tropical Medicine at Baylor, noted that Novavax’s technology is not precisely like old-fashioned protein vaccine: They turn the coronavirus into a particle-like shape. That makes it more visible to the immune system but the process involved could make tech transfer more difficult. She says the company may have been a bit too ambitious with its production targets.


“The aspiration goal they have is great, but technology transfer is not easy,” says Bottazzi, who is helping develop a more traditional protein-based vaccine.


Novavax signed a partnership with Takeda last summer to produce 250 million doses. Takeda opted not to build its own Covid-19 shot as they focused on bringing Dengue vaccine to market, but they had facilities to build someone else’s vaccine. In 2014, they won a Japanese government grant to build 6,000 liters, two-story-high steel bioreactors in their plant in the southern city of Hikari.


Novavax’s scientists, though, haven’t been able to fly into Japan to do tech transfer because of government restrictions. Instead, the two manufacturing teams have met remotely, trying to make sure that Takeda got identical equipment and raw materials Novavax used elsewhere, that their team is set up and could follow the exact same process, and they had the right quality tests to make sure the final product is the same.


“You have to spend typically months, many months and thousands of person hours,” Venkayya said. “It’s very, very complicated and a lot can go wrong.”


Takeda’s Rajeev Venkayya has been trying to set up Novavax’s production in Japan, although neither he nor Novavax’s team can enter the country




Nearly eight months after Takeda and Novavax signed an agreement, the Hikari facility is still not making vaccines. And Venkayya said it may not begin production this year.


The problem is the same one that has affiliated the globe: the supply of raw materials. Although Novavax has established a manufacturing network across the globe, they’re missing key components to keep it running. That includes single-use bags that encase the insect cells when they’re inside the bioreactors. To get the Czech facility running, Trizzino says, they also need a filter that’s used throughout the production process, including for purification.


Those delays have cost the company. Reuters reported in March that they forced the company to push back contract negotiations with the EU, as the Czech facility couldn’t make enough doses to supply the continent.



Novavax executives and their partners at the Serum Institute have said the US government is restricting exports, although the reality is a bit more complicated. There’s a shortage of both components globally as supply chains strain under an unprecedented vaccination effort. The companies that make filters, for example, don’t have enough raw materials to make them, says Matthew Johnson, who leads cGMP at the Duke Human Vaccine Institute.


The Defense Production Act doesn’t directly stop companies that produce components from exporting them, but it requires them to give the government priority on orders, meaning supply can continue once the US has enough to produce the vaccines it’s ordered but not enough but not until then.


“As long as they are fulfilling their contractual agreements with the US, a Defense Production Act priority rating doesn’t impact what they do or how they engage in other business,” a spokesperson for HHS said in an email. “It is our legal obligation to ensure that a company only uses a Defense Production Act priority rating to satisfy U.S. Government orders.”


Trizzino said those issues should be resolved by the second half of this year, at which point public health experts hope it will join a continued rollout of J&J and AstraZeneca’s vaccines. The EMA has insisted the benefits of the two vaccines far outweigh the risks, although countries around the world are still deliberating.


Novavax may, however, still face a different export ban at that point. The Serum Institute contracted to produce 1 billion doses of Novavax’s vaccine in 2021, many of which are designated for COVAX. They’re already behind, and experts fear that India could keep its export ban on vaccines in place even after production scales up.


Still, there are other ways Novavax’s vaccine could get deployed around the world.  Although the biotech agreed to give the federal government 100 million doses, Morrison noted that the US will likely have more Covid-19 vaccine than it needs by the time Novavax gets past the FDA. Earlier this month, he authored a report calling among other things for the federal government to donate its excess doses to foreign governments.


He pointed to the recent launch event for a new Covax drive, where Gavi CEO Seth Berkley and others stressed the need not only for companies to sell but also for vaccinated countries to donate doses.


“Their tone has changed,” Morrison said. “They are desperate for donated shares.”

https://endpts.com/as-fears-mount-over-jj-and-astrazeneca-novavax-enters-a-shaky-spotlight/

Valneva Begins Phase 3 Trial for Inactivated, COVID Vax Using Dynavax Adjuvant

 Dynavax Technologies Corporation (NASDAQ: DVAX), a biopharmaceutical company focused on developing and commercializing novel vaccines, today announced Valneva SE has initiated a pivotal Phase 3 clinical trial for its inactivated, COVID-19 vaccine candidate, VLA2001, using Dynavax's CpG 1018 adjuvant. The Phase 3 trial "Cov-Compare", (VLA2001-301), will compare Valneva's SARS-CoV-2 vaccine candidate, VLA2001, against AstraZeneca's conditionally approved vaccine, Vaxzevria, in a comparative immunogenicity trial.

The initiation of the Cov-Compare trial follows positive initial results from Valneva's Phase 1/2 clinical trial, which demonstrated that the safety profile and immunogenicity were supportive of further development.

Cov-Compare (VLA2001-301) is a randomized, observer-blind, controlled, comparative immunogenicity trial in approximately 4,000 adults. Its primary objective is to demonstrate the superiority of VLA2001 compared to Vaxzevria administered in a two-dose immunization schedule four weeks apart, in terms of Geometric Mean Titer ratio of SARS-CoV-2-specific neutralizing antibodies at two weeks after the second vaccination (i.e. Day 43) in adults aged 30 years and older. It will also evaluate the safety and tolerability of VLA2001 at two weeks after the second vaccination in adults aged 18 years and older.

The trial will be conducted at approximately 25 sites in the U.K. and is supported by the U.K. National Institute for Health Research. Approximately 3,000 participants 30 years of age and older will be randomized in a 2:1 ratio to receive two intramuscular doses of either VLA2001 (n=2,000) or Vaxzevria (n=1,000) at the recommended dose level, 28 days apart, on Days 1 and 29. For immunogenicity analyses, samples from approximately 1,200 participants (600 per group) who have been tested sero-negative for SARS-CoV-2 at screening will be analyzed. Approximately 1,000 participants that are under 30 years of age will be placed in a non-randomized treatment group and receive VLA2001 28 days apart.

Subject to successful Phase 3 data, Valneva intends to make a regulatory submission in the autumn of 2021 for initial approval.

https://www.streetinsider.com/Corporate+News/Valneva+Begins+Pivotal+Phase+3+Clinical+Trial+for+Inactivated%2C+COVID-19+Vaccine+Candidate+Using+Dynavax+%28DVAX%29+CpG+1018+Adjuvant/18292235.html

Research lab plays pivotal role in new COVID-19 vaccine now in trials

 Human clinical trials have begun on a new vaccine candidate that may protect against not only SARS-CoV-2, the virus that causes COVID-19, but against at least two of the variants emerging around the world. The development of this new vaccine was guided by structural information on the virus obtained at the Advanced Photon Source (APS), a U.S. Department of Energy (DOE) Office of Science User Facility at DOE's Argonne National Laboratory, and other light sources.

Trials are taking place at the Walter Reed Army Institute of Research (WRAIR), part of the U.S. Army Medical Research and Development Command, following up on early tests that showed promising results.

"The structural biology work is useful in terms of knowing that the  design is able to bind to protective antibodies, and to see exactly where they bind on the virus. Those two pieces of information are the bread and butter that helped us create the vaccine design."—Dr. Gordon Joyce, chief of the Structural Biology Section at the Henry M. Jackson Foundation for the Advancement of Military Medicine.

The new vaccine, called spike ferritin nanoparticle (SpFN), uses a multifaced sphere design, one that mimics the virus itself, with protruding spikes. In addition to generating a strong immune response, the design of the vaccine may help provide broader protection, shielding against the virus's mutations. Preclinical studies indicate that SpFN induces highly potent and broadly neutralizing antibody responses against the SARS-CoV-2 virus, as well as two major variants—B.1.1.7, first seen in the U.K., and B.1.351, first seen in South Africa—and the SARS-CoV-1 virus, which caused the severe acute respiratory syndrome outbreak in the early 2000s.

Since January of 2020, the APS has made its resources available to the worldwide scientific community for COVID-19 research, and the ultrabright X-rays it generates have helped scientists determine more than 160 structures of the proteins that make up SARS-CoV-2.

"We used the APS to generate high-resolution protein structures, and we used that information as a major component of the pipeline to develop our vaccine," said Dr. Gordon Joyce, chief of the Structural Biology Section at the Henry M. Jackson Foundation for the Advancement of Military Medicine (HFJ), supporting the WRAIR. Joyce developed this new vaccine with Dr. Kayvon Modjarrad, director of the Emerging Infectious Diseases Branch (EIDB) at WRAIR, who leads the Army's COVID-19 vaccine research efforts.

Joyce, Modjarrad and their colleagues used a technique called crystallography—basically shining X-rays onto synthetic protein crystals grown with particular antibodies, to capture detailed pictures of the virus's spike protein—to test whether their nanoparticles have the correct structure and function to elicit an immune response that can neutralize the virus.

"The structural biology work is useful in terms of knowing that the vaccine design is able to bind to protective antibodies, and to see exactly where they bind on the virus," Joyce said. "Those two pieces of information are the bread and butter that helped us create the ."

Joyce credited the work done at the APS and other light sources around the world with helping to speed up the development of COVID-19 vaccines. He said the long-term research goal involves using crystallography to search for a vaccine against all variants of SARS-CoV-2 and other coronaviruses, in order to get ahead of future outbreaks.

The APS also played a foundational role in the development of all three of the COVID-19 vaccines currently being distributed in the United States.

The phase 1 study of this new vaccine is being conducted at WRAIR's Clinical Trials Center and will enroll 72 healthy adult volunteers ages 18-55. Participants will be randomly placed in placebo or experimental groups. WRAIR is also providing expertise and support to the interagency U.S. Federal Government response aimed at accelerating the development of other COVID-19 vaccines, therapeutics and diagnostics.

"We are in this for the long haul," said Modjarrad. "We have designed and positioned this platform as the next generation vaccine, one that paves the way for a universal vaccine to protect against not only the current virus, but also to counter future variants, stopping them in their tracks before they can cause another pandemic."

More information: Michael G. Joyce et al. Efficacy of a Broadly Neutralizing SARS-CoV-2 Ferritin Nanoparticle Vaccine in Nonhuman Primates, (2021). DOI: 10.1101/2021.03.24.436523

https://medicalxpress.com/news/2021-04-lab-pivotal-role-covid-vaccine.html

British variant is 45% more contagious than the original virus

 A new study at Tel Aviv University found that the British variant (termed: B.1.1.7) of COVID-19 is 45% more contagious than the original virus. The researchers relied on data from about 300,000 PCR tests for COVID-19 obtained from the COVID-19 testing lab, which was established in collaboration with the Electra Group.

The new study was conducted by Prof. Ariel Munitz and Prof. Moti Gerlitz of the Department of Clinical Microbiology and Immunology at the Sackler Faculty of Medicine, together with Dr. Dan Yamin and Ph.D. student Matan Yechezkel from the Laboratory for Epidemic Modeling and Analysis (LEMA) at the Department of Industrial Engineering, all at Tel Aviv University. The study's results were published in the prominent scientific journal Cell Reports Medicine.

The Electra-TAU laboratory was established in March 2020, right after the outbreak of the first wave of the pandemic in Israel. To date, it has analyzed hundreds of thousands of tests from all over the country—from public drive-in test facilities, as well as programs targeting specific populations—such as 'Shield for Fathers and Mothers' which routinely ran tests in at-risk hotspots like .

Prof. Ariel Munitz explains: "We use a kit that tests for three different viral genes. In the British variant, also known as B.1.1.7, one of these genes, the S gene, has been erased by the mutation. Consequently, we were able to track the spread of the variant even without genetic sequencing."

According to Prof. Munitz, the data from the lab shows that the spread of the British variant was very rapid: On December 24, 2020 only 5% of the positive results were attributed to the British variant. Just six weeks later, in January 2021, this variant was responsible for 90% of COVID-19 cases in Israel. The current figure is about 99.5%.

"To explain this dramatic increase, we compared the R number of the SARS-CoV-2 virus with the R of the British variant. In other words, we posed the question: How many people, on the average, contract the disease from every person who has either variant? We found that the British variant is 45% - almost 1.5 times—more contagious."

In the second stage of the study, the researchers segmented contagion by age groups. The results indicated that the turning point for the 60+  compared to other age groups occurred two weeks after 50% of Israel's 60+ population received their first vaccine shot.

"Until January we saw a linear dependence of almost 100% between the different  in new cases per 1,000 people," says Dr. Dan Yamin. "Two weeks after 50% of the 60+ population received the first dose of the vaccine this graph broke sharply and significantly. During January a dramatic drop was observed in the number of new cases in the 60+ group, alongside a continued rise in the rest of the population. Simply put, since more than 90% of those who died from COVID-19 were over 60, we can say that the vaccine saved hundreds of lives—even in the short run."

Moreover, the new study proves that active monitoring of at-risk populations works. "There is a  for determining whether a specific test is positive or negative for the virus—with a lower value indicating a higher viral load," says Prof. Munitz. "When we compared the threshold values of the different genes in 60+ residents of retirement homes with the values measured in 60+ persons in the general population, we saw significantly higher values in the retirement homes. This means that the viral load in retirement homes was lower compared to the rest of the population.

Since the residents of retirement homes are tested routinely, while other people are usually tested only when they don't feel well or have been in contact with someone who had tested positive for the virus, we conclude that constant monitoring of at-risk populations is a method that works. It is important to emphasize: the relatively low viral load was found in retirement homes despite the fact that the British variant had already begun to spread in all populations. Consequently, we show that monitoring retirement homes, together with vaccination that gives precedence to vulnerable populations, prevent illness and mortality."

Dr. Yemin concludes: "Due to crowded conditions, large households and age distribution in the Israeli population, the  had a more favorable environment for spreading in Israel compared to most Western countries. Our message to the world is that if with our problematic starting point a distinct decline was identified, other Western countries can certainly expect the curve to break—despite the high contagion of the British variant—with a dramatic drop in severe cases following the vaccination of 50% of the older population, alongside targeted testing at risk epicenters."

More information: A. Munitz et al, BNT162b2 Vaccination Effectively Prevents the Rapid Rise of SARS-CoV-2 Variant B.1.1.7 in high risk populations in Israel, Cell Reports Medicine (2021). DOI: 10.1016/j.xcrm.2021.100264

https://medicalxpress.com/news/2021-04-british-variant-contagious-virus.html

Predicting the next pandemic virus is harder than expected

 The observation that most of the viruses that cause human disease come from other animals has led some researchers to attempt "zoonotic risk prediction" to second-guess the next virus to hit us. However, in an Essay publishing April 20th in the open access journal PLOS Biology, led by Dr. Michelle Wille at the University of Sydney, Australia with co-authors Jemma Geoghegan and Edward Holmes, it is proposed that these zoonotic risk predictions are of limited value and will not tell us which virus will cause the next pandemic. Instead, we should target the human-animal interface for intensive viral surveillance.

So-called zoonotic viruses have caused epidemics and pandemics in humans for centuries. This is exactly what is occurring today with the COVID-19 pandemic: the novel coronavirus responsible for this disease—SARS-CoV-2—emerged from an , although exactly which species is uncertain.

Therefore, a key question is whether we can predict which animal or which virus group will most likely cause the next pandemic? This has led researchers to attempt "zoonotic risk prediction," in which they attempt to determine which virus families and host groups are most likely to carry potential zoonotic and/or pandemic viruses.

Dr. Wille and her colleagues identify several key problems with zoonotic risk prediction attempts.

First, they're based on tiny data sets. Despite decades of work, we have probably identified less than 0.001% of all viruses, even from the mammalian species from which the next   will likely emerge.

Second, these data are also highly biased towards those viruses that most infect humans or agricultural animals, or are already known to zoonotic. The reality is that most animals have not been surveyed for viruses, and that viruses evolve so quickly that any such surveys will soon be out of date and so of limited value.

The authors instead argue that a new approach is needed, involving the extensive sampling of animals and humans at the places where they interact—the animal-human interface. This will enable novel  to be detected as soon as they appear in humans and before they establish pandemics. Such enhanced surveillance may help us prevent something like COVID-19 ever happening again.


Explore further

Risk of viruses emerging in humans may not depend on their animal host

More information: Wille M, Geoghegan JL, Holmes EC (2021) How accurately can we assess zoonotic risk? PLoS Biol 19(4): e3001135. doi.org/10.1371/journal.pbio.3001135
https://phys.org/news/2021-04-pandemic-virus-harder.html

Alaska joins Florida lawsuit challenging CDC guidelines, urging cruise ships be allowed to sail

 The state of Alaska is joining a Florida lawsuit against the Centers for Disease Control and Prevention in an effort to get the agency to allow cruise ships to begin sailing immediately.

Gov. Mike Dunleavy’s office announced in a Tuesday press release that Alaska will join the lawsuit that was filed in early April. It challenges the CDC’s no sail order for the cruise industry. The CDC issued new guidance, also in early April, providing a framework to get cruise ships sailing safely again, but the order did not mean ships could sail immediately.

Tuesday’s announcement that Alaska will join Florida’s lawsuit comes after Dunleavy sent a letter to the White House warning of the dire economic impacts Alaska would feel in the absence of a second cruise season this summer.

According to the governor’s office, the CDC’s conditional sailing order doesn’t take into account Alaska’s relatively high vaccination rates compared to other states. While Alaska once led the country in terms of vaccination rates, CDC data reported by the New York Times shows the state has fallen down those rankings in recent weeks.

The announcement from the governor’s office also notes Alaska’s relatively low rates of hospitalization due to COVID-19.

“The Conditional Sailing Order also fails to recognize the cruise industry’s voluntary safety measures and the safe resumption of cruising in other countries,” the release states.

In the release, the governor’s office also asserts that the cruise ship industry is being treated differently from other travel sectors, like flying.

“Alaska has urged the CDC to withdraw or amend its Conditional Sailing Order to allow for a cruise season in Alaska,” Dunleavy is quoted as saying in the release. “Alaskan families and small businesses need fast action to protect their ability to work and provide for their families. We have been told to follow the science and facts. Cruise ships have demonstrated their ability to provide for the safety of passengers and crew, and Alaska has led the nation in vaccinations and low hospitalization rates. We deserve the chance to have tourism and jobs.”

Maritime lawyers have said such a lawsuit it not expected to succeed in court, but that the pressure put on the federal agency by the publicity of the lawsuits could pressure the federal government to speed up the process of allowing cruise ships to sail once more.

“Through this lawsuit, Alaska seeks to protect its citizens and its interests by forcing the CDC to act within the limited authority Congress granted it,” said Alaska Attorney General Treg Taylor in the press release. “CDC simply does not have the authority to arbitrarily shut down an entire industry.”

https://www.alaskasnewssource.com/2021/04/21/alaska-joins-florida-lawsuit-challenging-cdc-guidelines-urging-cruise-ships-be-allowed-to-sail/

Oral hygiene could help reduce COVID-19 severity

 COVID-19 could pass into people’s lungs from saliva with the virus moving directly from mouth to bloodstream - particularly if individuals are suffering from gum disease, according to new research.

Evidence shows that blood vessels of the lungs, rather than airways, are affected initially in COVID-19 lung disease with high concentrations of the virus in saliva and periodontitis associated with increased risk of death.

The researchers propose that dental plaque accumulation and periodontal inflammation further intensify the likelihood of the SARS-CoV-2 virus reaching the lungs and causing more severe cases of the infection.

Experts say this discovery could make effective oral healthcare a potentially lifesaving action - recommending that the public take simple, but effective, daily steps to maintain oral hygiene and reduce factors contributing to gum disease, such as the build-up of plaque.

An international team of researchers from the UK, South Africa and the United States published their findings in the Journal of Oral Medicine and Dental Research. They note emerging evidence that specific ingredients of some cheap and widely available mouthwash products are highly effective at inactivating the SARS-CoV-2 virus.

Simple oral hygiene measures, including use of these specific mouthwash products, could help lower the risk of transmission of the virus from the mouth to the lungs in those with COVID-19, and help prevent severe instances of the infection.

Initial observations of lung CT scans from patients suffering from COVID-19 lung disease by Dr Graham Lloyd-Jones, a radiologist, led to a collaboration between medical and dental researchers on the potential entry route into the bloodstream. Co-author Iain Chapple, Professor of Periodontology at the University of Birmingham, commented: “This model may help us understand why some individuals develop COVID-19 lung disease and others do not. It could also change the way we manage the virus - exploring cheap or even free treatments targeted at the mouth and, ultimately, saving lives.

“Gum disease makes the gums leakier, allowing microorganisms to enter into the blood. Simple measures - such as careful toothbrushing and interdental brushing to reduce plaque build-up, along with specific mouthwashes, or even saltwater rinsing to reduce gingival inflammation - could help decrease the virus’ concentration in saliva and help mitigate the development of lung disease and reduce the risk of deterioration to severe COVID-19.”

The research team comprised of experts from Salisbury District Hospital, UK; the University of Birmingham, UK; and the Mouth-Body Research Institute, Los Angeles, California and Cape Town, South Africa.

Their new model is based on the mouth providing a breeding ground for the virus to thrive, with any breach in oral immune defences making it easier for the virus to enter the bloodstream.  Moving from blood vessels in the gums, the virus would pass through neck and chest veins - reaching the heart before being pumped into pulmonary arteries and small vessels in the lung base and periphery.

“Studies are urgently required to further investigate this new model, but in the meantime daily oral hygiene and plaque control will not only improve oral health and wellbeing, but could also be lifesaving in the context of the pandemic,” added Professor Chapple.

https://www.birmingham.ac.uk/university/colleges/mds/news/2021/04/oral-hygiene-reduce-covid-severity.aspx