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Thursday, April 22, 2021

Molecule that can help coronavirus escape antibodies discovered

 Researchers have found that a natural molecule can effectively block the binding of a subset of human antibodies to SARS-CoV-2. The discovery may help explain why some COVID-19 patients can become severely ill despite having high levels of antibodies against the virus.

In their research, published in Science Advances today (April 22, 2021), teams from the Francis Crick Institute, in collaboration with researchers at Imperial College London, Kings College London and UCL (University College London), found that biliverdin and bilirubin, natural molecules present in the body, can suppress the binding of  to the  spike.

As vaccines are rolled out globally, understanding immunity to SARS-CoV-2 and also how the  evades antibodies is critically important. However, there are still many unknowns. The ability of the immune system to control the infection and the quality of the antibody response are highly variable, and not well correlated, between individuals.

The Crick researchers were involved in the development of tests that see if a person has been exposed to the virus. The scientists discovered that the SARS-CoV-2 spike protein strongly binds to biliverdin, a molecule which was giving these proteins an unusual green colouration.

Working with teams at Imperial College London, UCL and Kings College London, they found that this natural molecule reduced antibody binding to the spike. They used blood sera and antibodies from people who were previously infected with SARS-CoV-2 and found that biliverdin could suppress the binding of human antibodies to the spike by as much as 30-50%, with some antibodies becoming ineffective at neutralizing the virus.

Such a significant impact was completely unexpected, as biliverdin only binds to a very small patch on the virus' surface. To find out the mechanism at work, the team at the Crick used cryo-electron microscopy and X-ray crystallography to look in detail at the interactions between the spike, the antibodies and biliverdin. They found that biliverdin attaches to the spike N-terminal domain and stabilizes it so that the spike is not able to open up and expose parts of its structure. This means that some antibodies are not able to access their target sites and so cannot bind to and neutralize the virus.

Annachiara Rosa, first author and postdoctoral training fellow in the Chromatin structure and mobile DNA Laboratory at the Crick, says: "When SARS-CoV-2 infects a patient's lungs it damages blood vessels and causes a rise in the number immune cells. Both of these effects may contribute to increasing the levels of biliverdin and bilirubin in the surrounding tissues. And with more of these molecules available, the virus has more opportunity to hide from certain antibodies. This is a really striking process, as the virus may be benefiting from a side effect of the damage it has already caused."

Peter Cherepanov, author and a group leader of the Chromatin structure and mobile DNA Laboratory at the Crick, says: "In the first months of the pandemic, we were extremely busy churning out viral antigens for SARS-CoV-2 tests. It was a race, as these tests were urgently needed. When we finally found the time to study our green proteins, we expected a mundane answer. Instead, we were astonished to discover a new trick the virus uses to avoid antibody recognition. This is a result of a collaborative effort of several amazing teams working at the Crick and three partner universities, led purely by scientific curiosity."

The researchers will continue this work from various angles, including measuring the levels of biliverdin and other haem metabolites in patients with COVID-19 and also exploring if it is possible to hijack the binding site used by biliverdin to potentially find new ways to target the virus.


More information: SARS-CoV-2 can recruit a haem metabolite to evade antibody immunity, Science Advances (2021). DOI: 10.1126/sciadv.abg7607 , advances.sciencemag.org/conten … 04/22/sciadv.abg7607

https://medicalxpress.com/news/2021-04-scientists-uncover-molecule-coronavirus-antibodies.html

Pfizer COVID-19 shot effective for people with chronic diseases: Israel study

 The COVID-19 vaccine developed by Pfizer and BioNTech is effective at preventing symptomatic and severe disease in people with some chronic illnesses, like diabetes and heart disease, the biggest real-world study showed on Thursday (Apr 22).

The analysis of almost 1.2 million people by Israel's largest healthcare provider will offer further hope for countries as they get shots into citizens' arms, particularly those considered vulnerable, and curb the pandemic that has killed more than 3.1 million people.

The vaccine was 80 per cent effective against symptomatic infection for people with heart or chronic kidney diseases, 86 per cent for people with type 2 diabetes, 75 per cent for cerebrovascular disease, and 84 per cent for people suffering from immunodeficiency, according to the Clalit Research Institute study.

For people who were vaccinated and were already suffering three or more chronic conditions or risk factors, such as heart disease, neurological disease, chronic kidney disease, chronic lung disease, smoking, pregnancy or obesity, the research shows it was 88 per cent effective in preventing symptomatic infection.

It was more than 90 per cent effective against severe disease for people with type 2 diabetes, heart or cerebrovascular disease and 100 per cent for people suffering from immunodeficiency.

The data are the latest from Israel where a universal and digitised healthcare system and the speedy vaccination programme have allowed researchers insights into the vaccine's potency. Clalit covers more than half of Israel's population.

The results were lower than the 96 per cent overall vaccine effectiveness seven days or more after the second dose, found by the study and the 95 per cent effectiveness found in clinical trials last year.

But researchers said they offered some optimism that the vaccine still offers protection against severe illness in people who become infected after they get their shots.

"Protection is mildly reduced among patients with several co-morbidities. These results are very encouraging, as they suggest that most COVID-19 cases will be prevented by vaccination even in the elderly and chronically ill," said Ran Balicer, Clalit's chief innovation officer.

"People with chronic diseases, multiple chronic or severe chronic diseases, should get vaccinated because the vaccine is very effective in protecting them against the high rates of complications that are expected," Balicer said.

The research was also carried out by Harvard and the University of Michigan and published in the New England Journal of Medicine on Thursday.

The Clalit study, compared 596,618 people vaccinated between Dec 20 2020 and Feb 14 against the same size group of unvaccinated people, matching age, gender and other characteristics.


The subgroup of the people with chronic diseases was about 130,000 people, Balicer said.

More than half of Israel's 9.3 million population has been fully inoculated since its vaccination drive began in late December. COVID-19 cases have dropped continuously since a mid-January peak as the economy has largely opened.

Until mid-April, Israel has documented 98 per cent fewer coronavirus cases, 93 per cent fewer critically ill and 87 per cent fewer COVID-19 deaths, according to Eran Segal, data scientist at the Weizmann Institute of Science.

Balicer said that although Israel was not yet at "herd immunity", the sharp drop was "proof of the potential of mass vaccination to really take us out of harm's way and shows the light at the end of the tunnel".

OBESITY, HYPERTENSION AND OVERWEIGHT

The large sample size allowed researchers to look more closely at subgroups of people with specific chronic diseases which would not necessarily be examined in a vaccine clinical trial, the researchers said.

It also found the vaccine to be 92 per cent effective in preventing symptomatic COVID-19 among people over the age of 70, 96 per cent for overweight people and 93 per cent for those suffering obesity and provided 90 per cent protection for people suffering from hypertension.


Danny Altmann, an immunology professor at the Imperial College London, said the study was among the first real world research to offer such granular data into vaccinated subgroups.

"Transitioning into real-world application, the effectiveness still looks terrific, but inevitably there are people who make poor vaccine responses," he said in an email to Reuters.

"We need to know who they are, why, and what can be done to rescue immunity. Next, we need to see the results from each of the big cohort studies for the various patient groups."

The US Centers for Disease Control and Prevention (CDC) Director Rochelle Walensky said that of the 84 million people who have been fully vaccinated in the United States, fewer than 6,000 have got sick with COVID-19 more than two weeks after being fully dosed.

Of those, nearly 400 were hospitalised and around 75 died, according to CDC data. Some of the hospitalisations and deaths were not due to COVID-19 infections.

Pfizer's late-stage clinical trial included people with co-morbidities. The most frequently reported co-morbidities were obesity (35.1 per cent), diabetes (with and without chronic complications, 8.4 per cent) and pulmonary disease (7.8 per cent), a spokesman said.

https://www.channelnewsasia.com/news/world/pfizer-covid-19-shot-effective-for-people-with-chronic-diseases-14674886

COVID liability bill heading to S Carolina governor's desk

 The South Carolina House is sending a bill preventing people with COVID-19 from suing businesses and other groups to the governor’s desk.

The proposal protects businesses as long as they follow guidelines to protect people from the virus. Dozens of other states have passed similar measures.

Opponents of the bill have said existing laws could handle the problem, pointing out earlier this year there was just one lawsuit pending in state court where someone blames a business for their illness.

But the South Carolina Chamber of Commerce, the South Carolina Manufacturers Alliance and other business groups said the bill protects companies and others as they try to bounce back from the economic downturn caused by the pandemic.

Gov. Henry McMaster is expected to sign the bill. He sent a letter to the House on Monday saying the state’s businesses “should not be placed at future risk for following the recommended safety protocols which allowed them to operate and employ people during the pandemic.”

The House passed the bill 89-18 on Thursday. The Senate approved it 40-3 in February.

https://apnews.com/article/health-business-coronavirus-c0fae8a50a9c5561375584f7533a3fdf

FDA meeting could decide future of 6 cancer drug approvals

 Next week, a panel of advisers to the Food and Drug Administration will convene to debate the merits of six recent cancer immunotherapy approvals handed out by the agency.

In each case, approval was granted on a conditional basis, backed by early data suggesting a treatment benefit that the drugs' makers were asked to confirm with follow-up studies. Now, several years later, those trials have come back with either inconclusive or negative data, resulting in unsupported accelerated approvals the FDA wants reviewed.

The three-day meeting, which starts April 27th, could lead the agency to request the withdrawal of some of those indications. Already, Merck & Co., Bristol Myers Squibb, Roche and AstraZeneca have each pulled their respective immunotherapies for use in certain types of lung and bladder cancers as part of an industry-wide evaluation by the FDA. 

Any similar recommendation by the committee next week would be noteworthy — only 10 cancer drug indications approved on an accelerated basis have ever been subsequently withdrawn, including those recent four. But the meeting could be more broadly consequential, potentially fueling a larger debate about the balance between speeding drugs to market and confirming clinical benefit. 

The question is particularly relevant for immunotherapy in cancer, development of which occurred faster than any other therapeutic area in the FDA's history. Yet the agency has argued withdrawals as a result of unconfirmed benefit do not necessarily undermine its approach to accelerated approval.

"The small percentage of drugs whose clinical benefit is ultimately not confirmed should be viewed not as a failure of accelerated approval but rather as an expected trade-off in expediting drug development that benefits patients with severe or life-threatening diseases," wrote Richard Pazdur, head of the FDA's Oncology Center of Excellence, and Julia Beaver, the center's chief of medical oncology, in a piece published by The New England Journal of Medicine Wednesday. 

Here are the six approvals up for discussion at next week's meeting, grouped by cancer type: 

Bladder cancer

In 2016, Roche won the first approval for its immunotherapy Tecentriq in urothelial cancer, which affects the lining of the bladder and other urinary tissue. AstraZeneca's Imfinzi and Merck's Keytruda quickly followed a year later. 

But subsequent studies of all three drugs have been unable to confirm the promising signs that led to their speedy approvals. The trial results have called into question immunotherapy's role in treating the disease, which is one of the world's most common cancer types.

Doubts about Tecentriq were caused by the IMvigor 211 trial, which read out results just 11 months after the drug's approval. Unlike the Phase 2 test that supported the FDA's decision, IMvigor 211 pitted Roche's drug against chemotherapy and found no difference in survival or remission rates. Imfinzi, too, didn't help patients live longer in a confirmatory study. 

Keytruda, as with the other two, was cleared for bladder cancer based on remission data from a mid-stage study. Similarly negative results followed. In a confirmatory trial, Keytruda plus chemotherapy didn't extend lives or keep patients' disease from progressing when compared to chemotherapy alone. 

The FDA narrowed the label for Tecentriq and Keytruda after testing showed an increased risk of death in patients whose tumors don't express the protein PD-L1. The only immunotherapy to extend lives in Phase 3 testing in advanced bladder cancer, Bavencio, was tested as a “maintenance” therapy to keep tumors at bay after surgery. The FDA approved it in 2020. 

Roche eventually withdrew one of two bladder cancer approvals for Tecentriq some four years after its initial clearance. AstraZeneca, too, pulled bladder cancer from Imfinzi's label. Keytruda's advanced bladder cancer approval — and a Tecentriq nod for patients who aren't eligible for chemotherapy — are two of the three that remain. Survival data has yet to be reported for the other approved immunotherapy in advanced disease, Bristol Myers' Opdivo. 

Experts will scrutinize Merck's and Roche's approvals next week.  

Liver cancer

Hepatocellular carcinoma is the most common form of liver cancer and, by some counts, one of the fastest growing causes of cancer death in the U.S. Since 1980, the incidence of HCC, which is primarily caused by past infections with hepatitis B or C viruses, has more than tripled. 

For more than a decade, doctors have prescribed a drug called Nexavar for treating HCC that's unremovable by surgery. Made by Bayer, Nexavar was cleared by the FDA in 2007 based on a study showing it extended patient survival for longer than placebo. 

More recently, in 2017 and 2018, the FDA granted accelerated clearances to first Opdivo and then Keytruda for second-line use if Nexavar didn't stop patients' cancers from progressing. The approvals were based on early data showing a small minority of participants in single-arm studies responded to treatment with the immunotherapies. But almost no trial volunteers experienced remission following treatment and, in the case of each drug, about half of those treated in the studies had their disease progress within a year. 

Follow-up studies from Merck and Bristol Myers weren't able to prove either drug extended survival versus, respectively, placebo or Nexavar in previously untreated HCC patients. Both approvals will be under review by the advisory panel next week. 

In the case of Opdivo, however, only the drug's use as monotherapy is up for debate. The drug is also cleared for use together with Bristol Myers' Yervoy, for which the response data appear a bit better. 

One factor that could influence the committee is the 2020 approval of Roche's Tecentriq, together with its other cancer drug Avastin for first-line HCC. Data supporting the OK showed treatment led to a 42% reduction in the risk of death versus Nexavar.

Breast cancer

Roche made history when, in May 2019, Tecentriq became the first immunotherapy cleared for use in breast cancer. The approval was based on study results that showed the drug, when given alongside chemotherapy in patients with metastatic triple-negative breast cancer, helped keep tumors from spreading longer than chemotherapy alone. 

The decision was a promising sign for immunotherapy's utility in triple-negative breast cancer, a particularly aggressive form of the disease that has mainly only been treatable with chemotherapy. A similar approval followed for Keytruda. Both drugmakers aim to bring immunotherapy into earlier disease settings, before or after surgery to remove a tumor.  

Yet two years after Tecentriq's approval in triple-negative breast cancer, it's still unclear whether the drug actually helps patients. For one, the benefit underlying the FDA's decision was modest: Tecentriq and chemo held tumors in check for a median of 7.4 months versus 4.8 months for those on chemo alone. More importantly, the survival benefit Roche eventually revealed for the Tecentriq-chemo regimen — a median of 21 months versus 18.7 for chemo alone — wasn't statistically significant, according to results published in the journal The Lancet

Another analysis suggested a greater benefit for patients whose tumors expressed PD-L1, a protein known to predict response to immunotherapy. But because the drug didn't extend lives for the full group of treated patients — one of the study's two main goals — that finding isn't considered statistically sound. What's more, the combination of Tecentriq and a similar type of chemotherapy also wasn't successful in a Phase 3 trial.   

Experts will debate the merits of Roche's data next week, and their recommendations could have implications for Keytruda. Merck hasn't yet reported confirmatory results from the study that led to Keytruda's more recent approval in triple-negative breast cancer.

Gastric cancer 

Gastric cancer is considered tough to treat because it's difficult to spot early. Often, a stomach tumor isn't found until it's already spread elsewhere. Up until recently, the only non-surgical treatments available were chemotherapy, radiation and, in some cases, targeted drugs. The disease has a five-year survival rate of 5%. 

The dearth of good options factored into the FDA's decision in September 2017 to approve Keytruda as the first immunotherapy for gastric cancer as well as a rare type of esophageal tumor. The agency cleared Keytruda for patients who had progressed despite two treatments and whose tumors expressed PD-L1. 

The decision was based on a small, single-arm Phase 2 study. Just 19 of the 143 patients who were PD-L1 positive responded to treatment. But 11 of those responses lasted at least six months and five continued for at least a year, suggestive of immunotherapy's potential, when it works, to have a lasting impact. 

That approval was quickly called into question, however. Three months after Keytruda was cleared, a Phase 3 study showed it didn't help patients live longer when used as a second-line treatment. In 2019, the drug failed another study, this time in the frontline setting. 

Merck still has other Keytruda trials ongoing in gastric cancer that could serve as confirmatory studies. But as of now, nearly four years after its initial approval, Keytruda's benefits remain unclear. Rival Opdivo, meanwhile, was just cleared for use after a study showed first-line treatment with it reduced the risk of death by a fifth.

https://www.biopharmadive.com/news/fda-cancer-immunotherapy-advisory-meeting-accelerated-approval/598874/

Valneva joins the phase 3 Covid-19 vaccine club

 As the world awaits pivotal US data on Novavax’s Covid-19 jab, plenty of other players are still trying to get in on the second wave of vaccines.

One of the latest, Valneva, pushed VLA2001 into a pivotal UK study yesterday, while Ocugen hopes that its contender, Covaxin, could get the nod in the US on the back of data from a phase 3 trial in India. The latter’s share price climbed 18% yesterday.

Both vaccines are based on inactivated coronavirus, making them different from currently authorised shots. With concerns over unusual blood clots with adenoviral vector-based vaccines from Astrazeneca and Johnson & Johnson, perhaps it is not too late for some of the Covid-19 vaccine laggards to make a mark, especially if booster doses are eventually needed.  

An analysis by Evaluate Vantage shows that there are several more candidates set to go into phase 3 this quarter, including a delayed project from Sanofi and Glaxosmithkline.

The second-wave of Covid-19 vaccines
ProjectDescriptionDeveloper(s)Update
Covaxin Inactivated virus (2 doses)Bharat Biotech/ OcugenData from ph3 India trial reported Apr 2021
NVX-CoV2373Recombinant nanoparticle (2 dose)NovavaxData reported from UK ph3 & S Africa ph2b trials; US/Mexico ph3 data due Q2 2021
CVnCoVmRNA (2 dose)CurevacHerald, Europe ph2/3 data due Q2 2021; Europe ph3 due 2021
Ad5-nCoVAdenovirus type 5 (1 dose)Cansino BiologicsPh3 recruiting in Russia & S America
ZyCoV-DDNA (3 doses)Zydus CadilaPh3 ongoing in India
Coronavirus-like particle Covid-19 vaccineCoronavirus-like particle (2 dose)Medicago/ GlaxoPh3 started Mar 2021 in Canada & US
COVID-19 S-TrimerTrimerised fusion protein (2 dose) Clover/DynavaxPh2/3 OUS Spectra trial started Mar 2021
VLA2001Inactivated virus (2 doses)Valneva/ DynavaxPh3 UK Cov-Compare study vs Astra's Vaxzevria started Apr 2021
Covid-19 vaccine projectRecombinant protein (2 doses) Sanofi/ Glaxo Ph3 due to start Q2 2021, pending results from ph2 trial
INO-4800DNA (2 doses)InovioPh3 due to start in Q2 2021, pending ph2 data & lifting of FDA hold
ARCT-021Self-amplifying mRNA (1 dose)ArcturusPh3 planned for Q2 2021 pending results from ph2 trial
Note: includes notable projects already progressed into phase 2/3 development or likely to do so imminently. List not exhaustive. Source: EvaluatePharma & company statements.

Valneva has beaten some more experienced players to phase 3. Its study will compare the immune response with VLA2001 versus that seen with Astrazeneca’s Vaxzevria in 4,000 UK participants.

One question is whether this trial will support approval outside the UK, but maybe this will not matter to Valneva for now. Only the UK has gone big on VLA2001 so far, ordering 100 million doses. The company recently ditched discussions with the European Commission, citing lack of progress, and hopes to sell its project to individual EU member states and countries outside the EU.

Outside India

Ocugen, meanwhile, has been up front about its desire to get Covaxin authorised by the FDA. The company gained US rights to the jab from Bharat Biotech in February, and the groups now have data from a second interim analysis of an Indian phase 3 trial in hand, in which Covaxin showed 78% efficacy, rising to 100% against severe disease.

The shot is already authorised in India, and Ocugen has said it hopes to gain a US nod in the second half of this year. There have been questions about the trial’s conduct, however; even notwithstanding these, approval on the strength of a trial conducted in India seems unlikely given the FDA’s stance so far.

A case in point is Novavax’s NVX-CoV2373, which performed well in a UK phase 3 trial. Enrolment into the project’s pivotal US trial was completed in February, and results have been due “any day” for a while now.

Novavax is facing concerns about its manufacturing capabilities, while there are also questions about dropouts in its US trial, given the availability of other Covid-19 vaccines. Hopefully, on the latter point, things will become clear soon with release of the results.

https://www.evaluate.com/vantage/articles/news/trial-results/valneva-joins-phase-3-covid-19-vaccine-club

Quidel Has Prelim Revenue for Q1

 Establishes distribution partnership agreement to increase access to At-Home COVID-19 testing

Quidel Corporation (NASDAQ: QDEL) ("Quidel"), a provider of rapid diagnostic testing solutions, cellular-based virology assays and molecular diagnostic systems, announced today preliminary results for the first quarter of 2021.

The Company expects revenues in the first quarter of 2021 to be in the range of $374 million to $376 million, up approximately 114% from $174.7 million in the prior year quarter. In the quarter, Quidel shipped nearly 15 million SARS tests, which compares favorably to the performance of our industry colleagues. COVID-19 revenues for the first quarter of 2021 are expected to be over $280 million, compared with $1.0 million for the first quarter of 2020. The first quarter of 2021 was marked by the lack of a respiratory season, resulting in lower sales of influenza and other respiratory disease products. Influenza revenues for the first quarter of 2021 are expected to be $5 million, compared with $79.6 million in the first quarter of 2020. Additionally, gross margins are expected to be approximately 80% for the period, with earnings growth over the prior year quarter in excess of 300%.

Douglas Bryant, president and chief executive officer of Quidel Corporation, said: "Over the past year, we have transformed our business through innovative new product introductions and strong operational execution. By all measures, the first quarter of 2021 reflected demand-side and manufacturing strength as we more than doubled our revenues year-over-year, with even greater growth in gross profit and net income. Still, as the COVID-19 pandemic response evolved, the operating environment was fluid, making it difficult to predict testing demand with certainty. In combination with the COVID-19 volatility, there was no circulating influenza in the community, and as a result, revenues came in well below our previous expectations."

Mr. Bryant concluded: "While we will not be providing an updated financial outlook for the full year 2021, given the volatility in the market and the impact on our results, we do look forward to discussing the important revenue growth drivers we have in front of us in more detail during our scheduled first quarter 2021 earnings call on May 6, 2021."

Vertex, Obsidian to Seek New Therapies That Regulate Gene Editing

 Vertex Pharmaceuticals Inc. on Thursday said it entered a research collaboration and licensing agreement with privately held Obsidian Therapeutics aimed at finding new therapies that regulate gene editing for the treatment of serious diseases.

Boston drug maker Vertex said Obsidian will use its cytoDRiVE technology to develop therapy candidates, while Vertex will have the exclusive option to license worldwide rights to the candidates, with responsibility for further development and commercialization.

Vertex said it will pay Obsidian up to $75 million in upfront payments and research milestones during the research term, including an equity investment in Obsidian.

The company said Obsidian is eligible to receive up to $1.3 billion in potential research, development, regulatory, and commercial milestone payments across up to five potential programs, along with royalties on sales of any products resulting from the collaboration.

https://www.marketscreener.com/quote/stock/VERTEX-PHARMACEUTICALS-11321/news/Vertex-Obsidian-to-Seek-New-Therapies-That-Regulate-Gene-Editing-33037120/